Setting noout flag per Ceph OSD

Prior to Ceph Luminous you could only set the noout flag cluster-wide which means that none of your OSDs will be marked as out.

On large(r) cluster this isn’t always what you want as you might be performing maintenance on a part of the cluster, but you sill want other OSDs which go down to be marked as out.

You can however also set the noout flag per OSD basis using this command:

ceph osd add-noout 0

This means that osd.0 will not be marked as out. You can verify this by looking at the OSDMap:

root@alpha:~# ceph osd dump|grep osd.0
osd.0 up in weight 1 up_from 5 up_thru 0 down_at 0 last_clean_interval [0,0) [v2:[2001:db8::100]:6800/1618,v1:[2001:db8::100]:6801/1618,v2:0.0.0.0:6802/1618,v1:0.0.0.0:6803/1618] [v2:[2001:db8::100]:6804/1618,v1:[2001:db8::100]:6805/1618,v2:0.0.0.0:6806/1618,v1:0.0.0.0:6807/1618] exists,noout,up c0c3e5c3-918b-4f3e-a48c-ea8e7c014a3b
root@alpha:~#

Here you can see the noout flag has been set for osd.0.

Removing the flag for this OSD is the reverse process:

ceph osd rm-noout 0

Other flags you can set per osd:

  • nodown
  • noup
  • noin
  • noout

Use this to your advance!

Comparing two Ceph CRUSH maps

Sometimes you want to test if changes you are about to make to a CRUSH map will cause data to move or not.

In this case I wanted to change a rule in CRUSH where it would use device classes, but I didn’t want any of the ~1PB of data in that cluster to move.

By swapping IDs I could prevent data to move:

root default {
id -50 # do not change unnecessarily
id -53 class hdd # do not change unnecessarily
id -122 class ssd # do not change unnecessarily
root default {
id -53 # do not change unnecessarily
id -50 class hdd # do not change unnecessarily
id -122 class ssd # do not change unnecessarily

Notice how I swapped the IDs. After this I updated the rule:

rule rgw {
id 6
type replicated
min_size 1
max_size 10
step take ams02-objects class hdd
step chooseleaf firstn 0 type host
step emit
}

I then compiled the CRUSHMap and ran crushtool to see if there were any differences:

root@mon01:~# crushtool -i crushmap --compare crushmap.new 
rule 0 had 0/10240 mismatched mappings (0)
rule 1 had 0/10240 mismatched mappings (0)
rule 2 had 0/10240 mismatched mappings (0)
rule 3 had 0/10240 mismatched mappings (0)
rule 4 had 0/10240 mismatched mappings (0)
rule 5 had 0/3072 mismatched mappings (0)
rule 6 had 0/10240 mismatched mappings (0)
maps appear equivalent
root@mon01:~#

No changes! So it was safe to inject this map:

root@mon01:~# ceph osd setcrushmap -i crushmap.new

HAProxy in front of Ceph Manager dashboard

The Ceph Mgr dashboard plugin allows for an easy dashboard which can show you how your Ceph cluster is performing.

In certain situations you can’t contact the Mgr daemons directly and you have to place a Proxy server between your computer and the Mgr daemons.

This can be done easily with HAProxy and the following configuration which assumes that:

  • SSL has been disabled in the Dashboard plugin
  • Dashboard plugin listens in port 8080
  • Mgr is running on the hosts mon01, mon02 and mon03
global
  log         127.0.0.1 local1
  log         127.0.0.1 local2 notice

  chroot      /var/lib/haproxy
  pidfile     /var/run/haproxy.pid
  maxconn     4000
  user        haproxy
  group       haproxy
  daemon

  stats socket /var/lib/haproxy/stats

defaults
  log                     global
  mode                    http
  retries                 3
  timeout http-request    10s
  timeout queue           1m
  timeout connect         10s
  timeout client          1m
  timeout server          1m
  timeout http-keep-alive 10s
  timeout check           10s
  maxconn                 3000
  option                  httplog
  no option               httpclose
  no option               http-server-close
  no option               forceclose

  stats enable
  stats hide-version
  stats refresh 30s
  stats show-node
  stats uri /haproxy?stats
  stats auth admin:haproxy

frontend https
  bind *:80
  default_backend ceph-dashboard

backend ceph-dashboard
  balance roundrobin
  option httpchk GET /
  http-check expect status 200
  server mon01 mon01:8080 check
  server mon02 mon02:8080 check
  server mon03 mon03:8080 check

You can now point your browser to the URL/IP of your HAProxy and use your Ceph dashboard.

In case a Mgr machine fails the health checks of HAProxy will make sure it fails over to on of the other Mgr daemons.

VXLAN with VyOS and Ubuntu 18.04

VXLAN

Virtual Extensible LAN uses encapsulation technique to encapsulate OSI layer 2 Ethernet frames within layer 4 UDP datagrams. More on this can be found on the link provided.

For a Ceph and CloudStack environment I needed to set up a Proof-of-Concept using VXLAN and some refurbished hardware. The main purpose of this PoC is to verify that VXLAN works with CloudStack, Ceph and Ubuntu 18.04

VyOS

VyOS is an open source network operating system based on Debian Linux. It supports VXLAN, so using this we were able to test VXLAN in this setup.

In production a other VXLAN capable router would be used, but for a PoC VyOS works just fine running on a regular server.

Configuration

The VyOS router is connected to ‘the internet’ with one NIC and the other NIC is connected to a switch.

Using static routes a IPv4 subnet (/24) and a IPv6 subnet (/48) are routed towards the VyOS router. These are then splitted and send to multiple VLANs.

As it took me a while to configure VXLAN under VyOS

I’m only posting that configuration.

interfaces {
    ethernet eth0 {
        address 31.25.96.130/30
        address 2a00:f10:100:1d::2/64
        duplex auto
        hw-id 00:25:90:80:ed:fe
        smp-affinity auto
        speed auto
    }
    ethernet eth5 {
        duplex auto
        hw-id a0:36:9f:0d:ab:be
        mtu 9000
        smp-affinity auto
        speed auto
        vif 300 {
            address 192.168.0.1/24
            description VXLAN
            mtu 9000
        }
    vxlan vxlan1000 {
        address 10.0.0.1/23
        address 2a00:f10:114:1000::1/64
        group 239.0.3.232
        ip {
            enable-arp-accept
            enable-arp-announce
        }
        ipv6 {
            dup-addr-detect-transmits 1
            router-advert {
                cur-hop-limit 64
                link-mtu 1500
                managed-flag false
                max-interval 600
                name-server 2a00:f10:ff04:153::53
                name-server 2a00:f10:ff04:253::53
                other-config-flag false
                prefix 2a00:f10:114:1000::/64 {
                    autonomous-flag true
                    on-link-flag true
                    valid-lifetime 2592000
                }
                reachable-time 0
                retrans-timer 0
                send-advert true
            }
        }
        link eth5.300
        mtu 1500
        vni 1000
    }
    vxlan vxlan2000 {
        address 109.72.91.1/26
        address 2a00:f10:114:2000::1/64
        group 239.0.7.208
        ipv6 {
            dup-addr-detect-transmits 1
            router-advert {
                cur-hop-limit 64
                link-mtu 1500
                managed-flag false
                max-interval 600
                name-server 2a00:f10:ff04:153::53
                name-server 2a00:f10:ff04:253::53
                other-config-flag false
                prefix 2a00:f10:114:2000::/64 {
                    autonomous-flag true
                    on-link-flag true
                    valid-lifetime 2592000
                }
                reachable-time 0
                retrans-timer 0
                send-advert true
            }
        }
        link eth5.300
        mtu 1500
        vni 2000
    }
}

VLAN 300 on eth5 is used to route VNI 1000 and 2000 in their own multicast groups.

The MTU of eth5 is set to 9000 so that the encapsulated traffic of VXLAN can still be 1500 bytes.

Ubuntu 18.04

To test if VXLAN was actually working on the Ubuntu 18.04 host I made a very simple script:

ip link add vxlan1000 type vxlan id 1000 dstport 4789 group 239.0.3.232 dev vlan300 ttl 5
ip link set up dev vxlan1000
ip addr add 10.0.0.11/23 dev vxlan1000
ip addr add 2a00:f10:114:1000::101/64 dev vxlan1000

That works! I can ping 10.0.0.11 and 2a00:f10:114:1000::1 from my Ubuntu 18.04 machine!

Placement Groups with Ceph Luminous stay in activating state

Placement Groups stuck in activating

When migrating from FileStore with BlueStore with Ceph Luminuous you might run into the problem that certain Placement Groups stay stuck in the activating state.

44    activating+undersized+degraded+remapped

PG Overdose

This is a side-effect of the new PG overdose protection in Ceph Luminous.

Too many PGs on your OSDs can cause serious performance or availability problems.

You can see the amount of Placement Groups per OSD using this command:

$ ceph osd df

Increase Max PG per OSD

The default value is a maximum of 200 PGs per OSD and you should stay below that! However, if you are hit by PGs in the activating state you can set this configuration value:

[global]
mon_max_pg_per_osd = 500

Then restart the OSDs and MONs which are serving the affected by this.

Usually you shouldn’t run into this, but if this hits you in the middle of a migration or upgrade this might save you.

Quick overview of Ceph version running on OSDs

When checking a Ceph cluster it’s useful to know which versions you OSDs in the cluster are running.

There is a very simple on-line command to do this:

ceph osd metadata|jq '.[].ceph_version'|sort|uniq -c

Running this on a cluster which is currently being upgraded to Jewel to Luminous it shows:

     10 "ceph version 10.2.6 (656b5b63ed7c43bd014bcafd81b001959d5f089f)"
   1670 "ceph version 10.2.7 (50e863e0f4bc8f4b9e31156de690d765af245185)"
    426 "ceph version 10.2.9 (2ee413f77150c0f375ff6f10edd6c8f9c7d060d0)"
     66 "ceph version 12.2.1 (3e7492b9ada8bdc9a5cd0feafd42fbca27f9c38e) luminous (stable)"

So 66 OSDs are running Luminous and 2106 OSDs are running Jewel.

Starting with Luminous there is also this command:

ceph features

This shows us all daemon and client versions in the cluster:

{
    "mon": {
        "group": {
            "features": "0x1ffddff8eea4fffb",
            "release": "luminous",
            "num": 5
        }
    },
    "osd": {
        "group": {
            "features": "0x7fddff8ee84bffb",
            "release": "jewel",
            "num": 426
        },
        "group": {
            "features": "0x1ffddff8eea4fffb",
            "release": "luminous",
            "num": 66
        }
    },
    "client": {
        "group": {
            "features": "0x7fddff8ee84bffb",
            "release": "jewel",
            "num": 357
        },
        "group": {
            "features": "0x1ffddff8eea4fffb",
            "release": "luminous",
            "num": 7
        }
    }
}

Do not use SMR disks with Ceph

Many new disks like the Seagate He8 disks are using a technique called Shingled Magnetic Recording to increase capacity.

As these disks offer a very low price per Gigabyte they seem interesting to use in a Ceph cluster.

Performance

Due to the nature of SMR these disks are very, very, very bad when it comes to Random Write performance. Random I/O is something that Ceph does a lot on the backing disks.

This results in disks spiking to 100% utilization very quickly causing all kinds of trouble with OSDS going down and committing suicide.

Do NOT use them

The solution is very simple. Do not use SMR disks in Ceph but stick to the traditional PMR disks in your Ceph cluster.

In the future we might see SMR support in the new BlueStore of Ceph, but at this moment no work has been done, so don’t expect anything soon.

Testing Ceph BlueStore with the Kraken release

Ceph version Kraken (11.2.0) has been released and the Release Notes tell us that the new BlueStore backend for the OSDs is now available.

BlueStore

The current backend for the OSDs is the FileStore which mainly uses the XFS filesystem to store it’s data. To overcome several limitations of XFS and POSIX in general the BlueStore backend was developed.

It will provide more performance (mainly writes), data safety due to checksumming and compression.

Users are encouraged to test BlueStore starting with the Kraken release for non-production and non-critical data sets and report back to the community.

Deploying with BlueStore

To deploy OSDs with BlueStore you can use the ceph-deploy by using the –bluestore flag.

I created a simple test cluster with three machines: alpha, bravo and charlie.

Each machine will be running a ceph-mon and ceph-osd proces.

This is the sequence of ceph-deploy commands I used to deploy the cluster

ceph-deploy new alpha bravo charlie
ceph-deploy mon create alpha bravo charlie

Now, edit the ceph.conf file in the current directory and add:

[osd]
enable_experimental_unrecoverable_data_corrupting_features = bluestore

With this setting we allow the use of BlueStore and we can now deploy our OSDs:

ceph-deploy --overwrite-conf osd create --bluestore alpha:sdb bravo:sdb charlie:sdb

Running BlueStore

This tiny cluster how runs three OSDs with BlueStore:

root@alpha:~# ceph -s
    cluster c824e460-2f09-4994-8b2f-108aedc52d19
     health HEALTH_OK
     monmap e2: 3 mons at {alpha=[2001:db8::100]:6789/0,bravo=[2001:db8::101]:6789/0,charlie=[2001:db8::102]:6789/0}
            election epoch 14, quorum 0,1,2 alpha,bravo,charlie
        mgr active: charlie standbys: alpha, bravo
     osdmap e14: 3 osds: 3 up, 3 in
            flags sortbitwise,require_jewel_osds,require_kraken_osds
      pgmap v24: 64 pgs, 1 pools, 0 bytes data, 0 objects
            43356 kB used, 30374 MB / 30416 MB avail
                  64 active+clean
root@alpha:~#
root@alpha:~# ceph osd tree
ID WEIGHT  TYPE NAME        UP/DOWN REWEIGHT PRIMARY-AFFINITY 
-1 0.02907 root default                                       
-2 0.00969     host alpha                                     
 0 0.00969         osd.0         up  1.00000          1.00000 
-3 0.00969     host bravo                                     
 1 0.00969         osd.1         up  1.00000          1.00000 
-4 0.00969     host charlie                                   
 2 0.00969         osd.2         up  1.00000          1.00000 
root@alpha:~#

On alpha I see that osd.0 only has a small partition for a bit of configuration and the rest is used by BlueStore.

root@alpha:~# df -h /var/lib/ceph/osd/ceph-0
Filesystem      Size  Used Avail Use% Mounted on
/dev/sdb1        97M  5.4M   92M   6% /var/lib/ceph/osd/ceph-0
root@alpha:~# lsblk 
NAME   MAJ:MIN RM  SIZE RO TYPE MOUNTPOINT
sda      8:0    0    8G  0 disk 
├─sda1   8:1    0  7.5G  0 part /
├─sda2   8:2    0    1K  0 part 
└─sda5   8:5    0  510M  0 part [SWAP]
sdb      8:16   0   10G  0 disk 
├─sdb1   8:17   0  100M  0 part /var/lib/ceph/osd/ceph-0
└─sdb2   8:18   0  9.9G  0 part 
sdc      8:32   0   10G  0 disk 
root@alpha:~# cat /var/lib/ceph/osd/ceph-0/type
bluestore
root@alpha:~#

The OSDs should work just like OSDs running FileStore, but they should perform better.

Running headless VirtualBox inside Nested KVM

For the Ceph training at 42on I use VirtualBox to build Virtual Machines. This is because they work under MacOS, Windows and Linux.

For the internal Git at 42on we use Gitlab and I wanted to use Gitlab’s CI to build my Virtual Machines automatically.

As we don’t have any physical hardware at 42on (everything runs in the cloud) I wanted to see if I could run VirtualBox Headless inside a VM with Nested KVM enabled.

Nested KVM

The first thing I checked was if my KVM Virtual Machine actually supported Nested KVM. This can be verified with the kvm-ok command under Ubuntu:

root@glrun01:~# kvm-ok 
INFO: /dev/kvm exists
KVM acceleration can be used
root@glrun01:~#

Now that’s verified I tried to install VirtualBox.

VirtualBox

Installing VirtualBox is straight forward. Just add the repository and install the packages. Don’t forget to reboot afterwards to make sure all kernel modules are loaded and properly installed.

apt-get install virtualbox

VirtualBox Extension Pack

The trick to get everything working properly is to install Oracle’s VirtualBox Extension Pack. It took me a while to figure out that I need to install it manually. It wasn’t done by default after install.

You need to download the pack and install it using the VBoxManage command.

wget http://download.virtualbox.org/virtualbox/5.0.24/Oracle_VM_VirtualBox_Extension_Pack-5.0.24.vbox-extpack
vboxmanage extpack install Oracle_VM_VirtualBox_Extension_Pack-5.0.24.vbox-extpack
vboxmanage list extpacks
vboxmanage setproperty vrdeextpack "Oracle VM VirtualBox Extension Pack"

With that installed and configured I rebooted the machine again just to be sure.

It works!

With that it actually worked. The VirtualBox VMs can now be built inside a Nested KVM machine controlled by Gitlab’s CI 🙂

Chown Ceph OSD data directory using GNU Parallel

Starting with Ceph version Jewel (10.2.X) all daemons (MON and OSD) will run under the privileged user ceph. Prior to Jewel daemons were running under root which is a potential security issue.

This means data has to change ownership before a daemon running the Jewel code can run.

Chown data

As the Release Notes state you will have to chown all your data to ceph:ceph in /var/lib/ceph.

chown -R ceph:ceph /var/lib/ceph

On a system with multiple OSDs this might take a lot of time, using GNU Parallel you can save yourself a lot of time.

Static UID

The ceph User and Group have been assigned static UID and GIDs in the major distributions:

  • Fedora/CentOS/RHEL: 167:167
  • Debian/Ubuntu: 64045/64045

Chown in parallel

Using these commands you can chown the data in /var/lib/ceph much faster.

WARNING: Make sure the OSDs are stopped on the system before you continue!

Now you can run these commands (Ubuntu in this case):

find /var/lib/ceph/osd -maxdepth 1 -mindepth 1 -type d|parallel chown -R 64045:64045
chown 64045:64045 /var/lib/ceph
chown 64045:64045 /var/lib/ceph/*
chown 64045:64045 /var/lib/ceph/bootstrap-*/*

The first command will take the longest. I tested it on a system with 24 OSDs all containing about 800GB of data. That took roughly 20 minutes.